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AT1G26665.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.992
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mediator complex, subunit Med10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mediator complex, subunit Med10; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med10 (InterPro:IPR019145); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med10 (TAIR:AT5G41910.1); Has 312 Blast hits to 312 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 119; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G26665EnsemblPlants:AT1G26665.1entrez:839207hmmpanther:PTHR13345Pfam:PF09748
Coordinates (TAIR10) chr1:+:9214510..9215426
Molecular Weight (calculated) 20913.70 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.52
Length 189 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPTQNTSAG IGGSNGTIRY QTNDGTSTVT VADDSKENLS QVINSIEKTL GVLHQLHLTV TSFTPASQLH LLQRLNSLVM ELDNMTKLSE KCNIQIPMEV
101: LNLIDDGKNP DEFTKDVLNS CIARNQVTKG KTDAFKDLRK HILEELEQNF PDEVDMYREI RASSAAEAKR LAQSQSVLPN GDAKVKNEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)