AT1G25320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01210.1); Has 141432 Blast hits to 94435 proteins in 2977 species: Archae - 110; Bacteria - 10539; Metazoa - 37556; Fungi - 5883; Plants - 72805; Viruses - 219; Other Eukaryotes - 14320 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8877988..8880180 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76435.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.16 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 702 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS 101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL 201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN 301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL 401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK 501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV 601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC 701: LQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)