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AT1G24822.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25097.1); Has 12 Blast hits to 12 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC004133EMBL:AC079374EMBL:CP002684EnsemblPlants:AT1G24822
EnsemblPlants:AT1G24822.1EnsemblPlants:AT1G25097.1entrez:839086entrez:839096
GeneID:839086GeneID:839096Gramene:AT1G24822.1Gramene:AT1G25097.1
IntAct:Q9FEF7KEGG:ath:AT1G24822KEGG:ath:AT1G25097PIR:H86380
Proteomes:UP000006548RefSeq:NP_173876.1RefSeq:NP_173886.1STRING:3702.AT1G25097.1
TAIR:AT1G24822TAIR:AT1G25097UniGene:At.48022UniGene:At.74441
UniProt:Q9FEF7
Coordinates (TAIR10) chr1:-:8774997..8777882
Molecular Weight (calculated) 24629.30 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.29
Length 216 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAPVVVAPA INLQHMDLPE GNEDVAAVLQ TSTQRWLNAA EWSILYNNHN LFPESNSFTI PIEVEGLYRV DNRFNQDSNT WRNTSAPSTC KNAINFYNVR
101: IATGLYRFDD DGDIVMDAEV QGGWVLCRKT VRNRGHCGTR LSHLYKPVFD RQFKMLKIHM MEDMIKDGEE KSLDTFVISR QLTTFTDLTG WAFGSSVIVE
201: FKVRLEHLRG KSIPIA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)