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AT1G24600.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.669
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSN7eggNOG:ENOG41108NQEMBL:AC000103EMBL:AY084505
EMBL:BT025307EMBL:CP002684EnsemblPlants:AT1G24600EnsemblPlants:AT1G24600.1
entrez:839074GeneID:839074Gramene:AT1G24600.1hmmpanther:PTHR34780
HOGENOM:HOG000090792KEGG:ath:AT1G24600OMA:REIMGPRPhylomeDB:Q9FYK4
PIR:E86379Proteomes:UP000006548RefSeq:NP_564221.1STRING:3702.AT1G24600.1
TAIR:AT1G24600UniGene:At.15911UniGene:At.69752UniProt:Q9FYK4
Coordinates (TAIR10) chr1:+:8720375..8720593
Molecular Weight (calculated) 8269.09 Da
IEP (calculated) 10.48
GRAVY (calculated) -0.81
Length 72 amino acids
Sequence (TAIR10)
(BLAST)
1: MEKKANHGDD VQESVPIIHS QVVKIKREFE KIQHPSLKQP EMPLVFREIM GPRRSRSPLG LGERERSIPV GN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)