AT1G24350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.764 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Acid phosphatase/vanadium-dependent haloperoxidase-related protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1124 Blast hits to 1124 proteins in 413 species: Archae - 0; Bacteria - 739; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:8639098..8640313 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 18053.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.18 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.26 | ||||||||||||||||||||||||
| Length | 168 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDSTATATS SSSTHYFSIF TNYPLISAVT SFTIAQFIKL FTSWYRERRW DLKQLIGSGG MPSSHSATVT ALAVAIGLQE GFGGSHFAIA LILASVVMYD 101: ATGVRLHAGR QAEVLNQIVY ELPAEHPLAE SRPLRELLGH TPPQVVAGGM LGSATAVTGY LFFRIATS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)