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AT1G24040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 119 Blast hits to 119 proteins in 41 species: Archae - 9; Bacteria - 28; Metazoa - 4; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJD8eggNOG:ENOG410XZGPEMBL:AC002423EMBL:AK117728EMBL:AK175581EMBL:AK175958EMBL:AK176031
EMBL:AK228115EMBL:BT010890EMBL:CP002684EnsemblPlants:AT1G24040EnsemblPlants:AT1G24040.1EnsemblPlants:AT1G24040.2entrez:839016
Gene3D:3.40.630.30GeneID:839016GO:GO:0008080Gramene:AT1G24040.1Gramene:AT1G24040.2hmmpanther:PTHR23091hmmpanther:PTHR23091:SF267
HOGENOM:HOG000077760InterPro:IPR000182InterPro:IPR016181KEGG:ath:AT1G24040OMA:AAFRYEHPfam:PF00583PhylomeDB:Q9LR91
Proteomes:UP000006548RefSeq:NP_173815.2RefSeq:NP_849703.1SUPFAM:SSF55729TAIR:AT1G24040UniGene:At.19813UniProt:Q9LR91
Coordinates (TAIR10) chr1:-:8505794..8506753
Molecular Weight (calculated) 36021.20 Da
IEP (calculated) 6.94
GRAVY (calculated) -0.30
Length 319 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALSISLAF SVDSLKPTQS TKFGFSSSSH RYPLLYSCKS HRSNLRFAFP PSSVSTATET GEENSKSTGN YAFLEESFRT GRFLSNDELE KLKTLEGFAY
101: FQELESGSMW VRVMRHEEMD STVHLLAESF GESMLLPSGY QSVLRFLIKQ YLIERREVLP HAVTLVGFFR KKVDEFSDDG EEEAVMAGTV EVCLEKRGAN
201: ASPPSPTPPK ESPYICNMTV KEDLRRRGIG WHLLKASEEL ISQISPSKDV YLHCRMVDEA PFNMYKKAGY EVVKTDTVLV LLMLQRRKHL MRKKLLPLCT
301: NPIVEMVGSD NELTSSANV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)