suba logo
AT1G23870.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.432
vacuole 0.218
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : trehalose-phosphatase/synthase 9
Curator
Summary (TAIR10)
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.
Computational
Description (TAIR10)
trehalose-phosphatase/synthase 9 (TPS9); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphatase synthase S8 (TAIR:AT1G70290.1); Has 4900 Blast hits to 4828 proteins in 1062 species: Archae - 56; Bacteria - 2863; Metazoa - 236; Fungi - 655; Plants - 621; Viruses - 0; Other Eukaryotes - 469 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0380eggNOG:COG1877eggNOG:KOG1050EMBL:KJ138988EnsemblPlants:AT1G23870EnsemblPlants:AT1G23870.1entrez:838998
ExpressionAtlas:W8QP88Gene3D:3.40.50.1000GeneID:838998GO:GO:0005992GO:GO:0016740Gramene:AT1G23870.1gramene_pathway:2.4.1.15
gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWYhmmpanther:PTHR10788hmmpanther:PTHR10788:SF14InterPro:IPR001830InterPro:IPR003337InterPro:IPR006379
InterPro:IPR023214KEGG:ath:AT1G23870KO:K16055OMA:YSRRCWTPaxDb:W8QP88Pfam:PF00982Pfam:PF02358
Pfam:Q9LRA7PhylomeDB:W8QP88ProteinModelPortal:W8QP88RefSeq:NP_173799.1SMR:W8QP88STRING:3702.AT1G23870.1SUPFAM:SSF53756
SUPFAM:SSF56784tair10-symbols:ATTPS9tair10-symbols:TPS9TIGRfam:TIGR00685TIGRfam:TIGR01484TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484
UniGene:At.41515UniGene:At.48224UniProt:Q9LRA7UniProt:W8QP88
Coordinates (TAIR10) chr1:+:8432695..8435506
Molecular Weight (calculated) 98501.10 Da
IEP (calculated) 6.30
GRAVY (calculated) -0.23
Length 867 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSRSCANFL DLASWDLLDF PQTQRALPRV MTVPGIISEL DGGYSDGSSD VNSSNSSRER KIIVANMLPL QAKRDTETGQ WCFSWDEDSL LLQLRDGFSS
101: DTEFVYIGSL NADIGISEQE EVSHKLLLDF NCVPTFLPKE MQEKFYLGFC KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY VSANKIFSDR VMEVINPEED
201: YVWIHDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR TLPVRDDLLR GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVFIK
301: ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGV DDMDIFKGIS LKLIAMERLF ETYWHMRGKL VLIQIVNPAR ATGKDVEEAK KETYSTAKRI
401: NERYGSAGYQ PVILIDRLVP RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY IICRQGTPGM DKAMGISHDS ARTSMLVVSE FIGCSPSLSG AIRVNPWDVD
501: AVAEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF MQDLERACRE HYNKRCWGIG FGLSFRVLSL SPSFRKLSID HIVSTYRNTQ RRAIFLDYDG
601: TLVPESSIIK TPNAEVLSVL KSLCGDPKNT VFVVSGRGWE SLSDWLSPCE NLGIAAEHGY FIRWSSKKEW ETCYSSAEAE WKTMVEPVMR SYMDATDGST
701: IEYKESALVW HHQDADPDFG ACQAKELLDH LESVLANEPV VVKRGQHIVE VKPQGVSKGL AVEKVIHQMV EDGNPPDMVM CIGDDRSDED MFESILSTVT
801: NPDLPMPPEI FACTVGRKPS KAKYFLDDVS DVLKLLGGLA AATSSSKPEY QQQSSSLHTQ VAFESII
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)