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AT1G23730.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : beta carbonic anhydrase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta carbonic anhydrase 3 (BCA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 4 (TAIR:AT1G70410.1); Has 5075 Blast hits to 5060 proteins in 1504 species: Archae - 26; Bacteria - 3914; Metazoa - 59; Fungi - 205; Plants - 361; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G23730-MONOMERBioGrid:24221EC:4.2.1.1eggNOG:COG0288eggNOG:KOG1578EMBL:AC005990EMBL:AY081265
EMBL:AY114551EMBL:CP002684EnsemblPlants:AT1G23730EnsemblPlants:AT1G23730.1entrez:838983Gene3D:3.40.1050.10GeneID:838983
Genevisible:Q9ZUC2GO:GO:0004089GO:GO:0005829GO:GO:0005886GO:GO:0008270GO:GO:0015976GO:GO:0016020
Gramene:AT1G23730.1gramene_pathway:4.2.1.1gramene_pathway:CYANCAT-PWYhmmpanther:PTHR11002hmmpanther:PTHR11002:SF15HOGENOM:HOG000125183InParanoid:Q9ZUC2
IntAct:Q9ZUC2InterPro:IPR001765InterPro:IPR015892iPTMnet:Q9ZUC2KEGG:00910+4.2.1.1KEGG:ath:AT1G23730KO:K01673
ncoils:CoilOMA:ENWIQICPANTHER:PTHR11002PaxDb:Q9ZUC2Pfam:PF00484Pfam:Q9ZUC2PhylomeDB:Q9ZUC2
PIR:D86371PRIDE:Q9ZUC2PRO:PR:Q9ZUC2PROSITE:PS00704ProteinModelPortal:Q9ZUC2Proteomes:UP000006548RefSeq:NP_173785.1
scanprosite:PS00704SMART:SM00947SMR:Q9ZUC2STRING:3702.AT1G23730.1SUPFAM:SSF53056TAIR:AT1G23730tair10-symbols:ATBCA3
tair10-symbols:BCA3UniGene:At.22964UniGene:At.71159UniProt:Q9ZUC2
Coordinates (TAIR10) chr1:+:8395965..8398014
Molecular Weight (calculated) 28830.50 Da
IEP (calculated) 7.00
GRAVY (calculated) -0.25
Length 258 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTESYEDAI KRLGELLSKK SDLGNVAAAK IKKLTDELEE LDSNKLDAVE RIKSGFLHFK TNNYEKNPTL YNSLAKSQTP KFLVFACADS RVSPSHILNF
101: QLGEAFIVRN IANMVPPYDK TKHSNVGAAL EYPITVLNVE NILVIGHSCC GGIKGLMAIE DNTAPTKTEF IENWIQICAP AKNRIKQDCK DLSFEDQCTN
201: CEKEAVNVSL GNLLSYPFVR ERVVKNKLAI RGAHYDFVKG TFDLWELDFK TTPAFALS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)