AT1G23280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : MAK16 protein-related | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:8260865..8262650 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35761.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.55 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.94 | ||||||||||||||||||||||||||||||||
| Length | 303 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQHDEVIWQV IRHKHCSYMA KIETGIFCRN QYNVTGICNR SSCPLANSRY ATIRDHDGVF YLYMKTIERA HMPNKLWERV KLPVNYEKAL EMIDKHLLYW 101: PKLLQHKVKQ RLTKMTQMRI RMRKLALKTR EVVVTTPRRQ IKRESRREEK AIKAAQLDKA IETELMERLK KGIYPTEIYN LSDSVFNKLL DREIETNDEV 201: EKEEEEEGVI EYVEGDDELE AEEEEDMEDF SGLPSKESYL EGDDHDSDDE DDDDAEEQVV IHKKGRALKK SDDNGKAKKK PRVVVEVEQE DADTRRSLKS 301: LKI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)