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AT1G23190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Phosphoglucomutase/phosphomannomutase family protein
Curator
Summary (TAIR10)
Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.
Computational
Description (TAIR10)
Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: cytosol, nucleus, plasma membrane, chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 7107 Blast hits to 7096 proteins in 2124 species: Archae - 111; Bacteria - 5258; Metazoa - 510; Fungi - 209; Plants - 166; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G23190-MONOMERBioGrid:24166BRENDA:5.4.2.2EC:5.4.2.2eggNOG:COG0033eggNOG:KOG0625EMBL:AC002311
EMBL:AC005292EMBL:AY059926EMBL:AY081589EMBL:CP002684EnsemblPlants:AT1G23190EnsemblPlants:AT1G23190.1entrez:838927
Gene3D:3.30.310.50Gene3D:3.40.120.10GeneID:838927Genevisible:O49299GO:GO:0000287GO:GO:0004614GO:GO:0005634
GO:GO:0005737GO:GO:0005829GO:GO:0005886GO:GO:0005975GO:GO:0005978GO:GO:0006006GO:GO:0009507
GO:GO:0009570GO:GO:0009590GO:GO:0010319GO:GO:0019252GO:GO:0019388GO:GO:0046686Gramene:AT1G23190.1
gramene_pathway:5.4.2.2gramene_pathway:PWY-5661gramene_pathway:PWY-621gramene_pathway:PWY-622gramene_pathway:PWY-842gramene_pathway:PWYQT-4437gramene_pathway:PWYQT-4466
gramene_pathway:SUCSYN-PWYhmmpanther:PTHR22573hmmpanther:PTHR22573:SF47HOGENOM:HOG000009550InParanoid:O49299IntAct:O49299InterPro:IPR005841
InterPro:IPR005843InterPro:IPR005844InterPro:IPR005845InterPro:IPR005846InterPro:IPR016055InterPro:IPR016066iPTMnet:O49299
KEGG:00520+5.4.2.10KEGG:ath:AT1G23190KO:K01835OMA:EIDDKRPPaxDb:O49299Pfam:O49299Pfam:PF00408
Pfam:PF02878Pfam:PF02879Pfam:PF02880PhylomeDB:O49299PIR:B86366PRIDE:O49299PRINTS:PR00509
PRO:PR:O49299PROSITE:PS00710ProteinModelPortal:O49299Proteomes:UP000006548Reactome:R-ATH-3322077Reactome:R-ATH-70221Reactome:R-ATH-70370
RefSeq:NP_173732.1scanprosite:PS00710SMR:O49299STRING:3702.AT1G23190.1SUPFAM:SSF53738SUPFAM:SSF55957TAIR:AT1G23190
tair10-symbols:PGM3UniGene:At.25429UniProt:O49299
Coordinates (TAIR10) chr1:+:8219946..8224186
Molecular Weight (calculated) 63174.00 Da
IEP (calculated) 6.22
GRAVY (calculated) -0.23
Length 583 amino acids
Sequence (TAIR10)
(BLAST)
001: MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT SFEGPEGKFD VEVFDPADDY
201: VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKGNI DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVASVA SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)