AT1G23020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.934 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ferric reduction oxidase 3 | ||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon. | ||||||||||||||||
| Computational Description (TAIR10) |
ferric reduction oxidase 3 (FRO3); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2651 Blast hits to 2646 proteins in 370 species: Archae - 2; Bacteria - 274; Metazoa - 566; Fungi - 1157; Plants - 480; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:8150187..8153530 | ||||||||||||||||
| Molecular Weight (calculated) | 80851.40 Da | ||||||||||||||||
| IEP (calculated) | 10.24 | ||||||||||||||||
| GRAVY (calculated) | 0.33 | ||||||||||||||||
| Length | 716 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAARGRLVVA RGNRSFSSII RKYSLKRETN KKVIKNVIKL LTMVILMGTV VIWIMMPTST YKKIWLKSMR AKLGKSIYFG KPGVNLLVYM FPMILLASLG 101: SIYLHLKKQT RVNQFNRMDR KKIDKFGALK RPMLVKAGLG IVTVTEVMFL MMFMALLLWS LANYFYHTFV TITPQSLPTD GDNLWQARLD SIAVRLGLTG 201: NICLGFLFYP VARGSSLLAA VGLTSESSTK YHIWLGNLVM TLFTSHGLCY CIYWISTNQV SQMLEWDRTG ISHLAGEIAL VAGLLMWATT FPAIRRRFFE 301: VFFYTHYLYM VFMLFFVFHV GISYALISFP GFYIFMVDRF LRFLQSRNNV KLVSARVLPC ETVELNFSKN PMLMYSPTSI LFVNIPSISK LQWHPFTITS 401: SSKLEPKKLS VMIKSQGKWS SKLHHMLASS NQIDHLAVSV EGPYGPASTD YLRHDSLVMV SGGSGITPFI SIIRDLLYVS STNAYKTPKI TLICAFKNSS 501: DLSMLNLILP NSTEISSFID IQIKAFVTRE KVSTCNMNII KTLSFKPYVS DQPISPILGP NSWLWLATIL SSSFMIFIII IAIISRYHIY PIDQSSKEYT 601: SAYTSLIYLL AISISVVATS TVAMLCNKKS YFKGLYQNVD ALSPLMIESS PDQLLPEFTN IHYGERPNLN KLLVGLKGSS VGVLVCGPRK MREEVAKICS 701: FGSAANLQFE SISFNW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)