AT1G23010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 ASURE: endoplasmic reticulum What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cupredoxin superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8147353..8149580 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66001.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.34 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 581 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESLLCRRRI KRVMVLIIAL TWLRSTCGEL EDQLFEVGKL KMFVDDLPDM PRLYGFNSVH GIIKPASLQI GMFSTKWKFH RDLPATPVFA YGTSRSKATV 101: PGPTIETVYG VDTYVTWRNH LPKSHILPWD PTISPATPKH GGIPTVVHLH GGIHEPTSDG NADAWFTAGF RETGPKWTKT TLHYENKQQP GNMWYHDHAM 201: GLTRVNLLAG LVGAYILRHH AVESPFQLPT GDEFDRPLII FDRSFRKDGS IYMNATGNNP SIHPQWQPEY FGDVIIVNGK AWPRLNVRRR KYRFRIINAS 301: NARFFKFFFS NGLDFIVVGS DSAYLSKPVM TKSILLSPSE IVDVVVDFYK SPSRTVVLAN DAPYPYPSGD PVNEENGKVM KFIINNESED DTCTIPKKLI 401: NYPNADVSNA VLTRYISMYE YVSNSDEPTH LLVNGLPYEA PVTETPKSGT TEVWEVINLT EDNHPLHIHL GLFKVVEQTA LLAAGLEEFK ECMTKQNDAV 501: KCQISKYARG KKTAVTAHER GWKNVFKMMP GHVTRILVRF SYIHTNASYP FDPTQEPGYV YHCHILDHED NMMMRPLKVI I |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)