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AT1G22890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41116S0eggNOG:KOG1396EMBL:AK317242EMBL:BT029388
EMBL:CP002684EnsemblPlants:AT1G22890EnsemblPlants:AT1G22890.1entrez:838896
GeneID:838896Gramene:AT1G22890.1KEGG:ath:AT1G22890OMA:SMAPPIF
Proteomes:UP000006548RefSeq:NP_173702.1STRING:3702.AT1G22890.1TAIR:AT1G22890
TMHMM:TMhelixUniGene:At.10448UniProt:A0JQ18
Coordinates (TAIR10) chr1:+:8102851..8103228
Molecular Weight (calculated) 7777.62 Da
IEP (calculated) 11.58
GRAVY (calculated) 0.02
Length 73 amino acids
Sequence (TAIR10)
(BLAST)
1: MAAKTSNLVA LLLSLFLLLL SISSQVGLGE AKRNLRNNLR LDCVSHPSPP PPHRSMAPPI FVPPSTSHKG QGP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)