AT1G22520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Domain of unknown function (DUF543) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Domain of unknown function (DUF543); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G72170.1); Has 107 Blast hits to 107 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:7953299..7954304 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 10357.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.63 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||
| Length | 99 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
1: METTKSNSSE SDVNAKWDAC LDLTARRFVY SSLGGAFAGL LFFRSPVTRW ASIAFGAGIG IGSAYTDCSR VFDASSSTSA TLLAAPKSTE TSVSQAAEE | ||||||||||||||||||||||||
| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)