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AT1G21920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Histone H3 K4-specific methyltransferase SET7/9 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT1G77660.1); Has 24355 Blast hits to 6247 proteins in 541 species: Archae - 0; Bacteria - 3533; Metazoa - 3700; Fungi - 215; Plants - 2241; Viruses - 0; Other Eukaryotes - 14666 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-262-MONOMEReggNOG:COG4642eggNOG:KOG0231EMBL:AC013482EMBL:AF370285EMBL:AY150425EMBL:CP002684
EnsemblPlants:AT1G21920EnsemblPlants:AT1G21920.1entrez:838794GeneID:838794GO:GO:0008168GO:GO:0016021GO:GO:0016301
Gramene:AT1G21920.1hmmpanther:PTHR23084hmmpanther:PTHR23084:SF145InterPro:IPR003409KEGG:ath:AT1G21920OMA:YFVKGRYPfam:PF02493
PhylomeDB:Q9SFE3Proteomes:UP000006548RefSeq:NP_173610.1SMART:SM00698SMR:Q9SFE3STRING:3702.AT1G21920.1SUPFAM:0038399
TAIR:AT1G21920TMHMM:TMhelixUniGene:At.21215UniProt:Q9SFE3
Coordinates (TAIR10) chr1:-:7704454..7705866
Molecular Weight (calculated) 46518.40 Da
IEP (calculated) 9.79
GRAVY (calculated) -0.54
Length 417 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)