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AT1G21840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.646
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : urease accessory protein F
Curator
Summary (TAIR10)
Encodes a urease accessory protein which is essential for the activation of plant urease.
Computational
Description (TAIR10)
urease accessory protein F (UREF); FUNCTIONS IN: nickel ion binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreF (InterPro:IPR002639); Has 962 Blast hits to 961 proteins in 436 species: Archae - 16; Bacteria - 785; Metazoa - 9; Fungi - 76; Plants - 41; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
BioGrid:24025DNASU:838786eggNOG:COG0830eggNOG:ENOG410II8WEMBL:AC007727EMBL:AC013482EMBL:AK175196
EMBL:BT012628EMBL:CP002684EMBL:HM369062EnsemblPlants:AT1G21840EnsemblPlants:AT1G21840.1entrez:838786GeneID:838786
Genevisible:Q9XHZ3GO:GO:0006807GO:GO:0016151GO:GO:0048554Gramene:AT1G21840.1hmmpanther:PTHR33620hmmpanther:PTHR33620:SF1
HOGENOM:HOG000049666InParanoid:Q9XHZ3IntAct:Q9XHZ3InterPro:IPR002639KEGG:ath:AT1G21840OMA:ETSQRAYPaxDb:Q9XHZ3
Pfam:PF01730Pfam:Q9XHZ3PhylomeDB:Q9XHZ3PIRSF:PIRSF009467PRIDE:Q9XHZ3PRO:PR:Q9XHZ3ProteinModelPortal:Q9XHZ3
Proteomes:UP000006548RefSeq:NP_173602.1STRING:3702.AT1G21840.1TAIR:AT1G21840tair10-symbols:UREFUniGene:At.49902UniProt:Q9XHZ3
Coordinates (TAIR10) chr1:+:7666859..7667581
Molecular Weight (calculated) 26404.90 Da
IEP (calculated) 6.08
GRAVY (calculated) 0.14
Length 240 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)