AT1G21650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Preprotein translocase SecA family protein | ||||||||||||
| Curator Summary (TAIR10) |
Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. | ||||||||||||
| Computational Description (TAIR10) |
Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA conserved site (InterPro:IPR020937), SecA DEAD-like (InterPro:IPR011115), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Albino or Glassy Yellow 1 (TAIR:AT4G01800.1); Has 21976 Blast hits to 13078 proteins in 2820 species: Archae - 0; Bacteria - 13647; Metazoa - 53; Fungi - 1; Plants - 97; Viruses - 0; Other Eukaryotes - 8178 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:7592891..7600590 | ||||||||||||
| Molecular Weight (calculated) | 118939.00 Da | ||||||||||||
| IEP (calculated) | 6.45 | ||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||
| Length | 1051 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGSVSNLVSP NICHPAPPCL TSRSNKFPWT KPISGLLFYR SVTPIKRCHL VRRSCVVSAS LTGNLGRLKR NVQDFTSMNY WVVRDYYRLV ESVNSLEPQI 0101: QSLSDEQLKA KTAEFRERLA RGESLADMQA EAFAVVREAA KRTIGMRHFD VQIIGGGVLH DGSIAEMKTG EGKTLVSTLA AYLNALTGEG VHVVTVNDYL 0201: AQRDAEWMGR VHRFLGLSVG LIQRGMKAEE RKFNYSCDIT YTNNSELGFD YLRDNLTSNR EQLVMRWPKP FHFAIVDEVD SVLIDEGRNP LLISGEANEN 0301: AARYPVAAKV AELLVKDSHY KVELKENSVE LTEEGISLAE MALETGDLWD ENDPWARFVM NALKAKEFYK RDVQYIVRDG KALIINELTG RVEDKRRWSE 0401: GVHQAVEAKE GLEIQADSIV VAQITYQSLF KLYPKLSGMT GTAKTEEKEF LKMFQIPVIE VPTNLSNIRI DLPIQAFATA RGKWEHVRRE VEDMFGQGRP 0501: VLVGTTSVEN SEYLSELLKE WGIPHNVLNA RPKYAAREAD FIAQAGRKYA ITISTNMAGR GTDIILGGNP KMLAREIIED SILSYLTSEV LADNIDDDEL 0601: SQKVLSKIKV GPSSLALLAR ASLMAKYVGK SESKSWTRKK AKSVVTESLE KSQTMDPMEL QNLINEQSEM YPLGPAIALA YLSVLKDCEA HCLHEGSEVK 0701: RLGGLHVIGT SLHESRRIDN QLRGRAGRQG DPGSTRFMIS LQDEMFQKFN FDTEWAVRLI SKITNDEDLP IEGDTIVKQL LALQINAEKY FFGIRKSLVE 0801: FDEVLEVQRK HVYDLRQLLL TGENESCSQH IFQYMQAVVD EIVVGNSNPQ KHPRYWSLAK LLKEFMAISG NLLDEETMLQ SLENLHEGSS IEMEDLSLPH 0901: LPKPPNAFRG IRRKNSSLRR WLDICSDNLT GSGSYRTLIN LLRKFLGDYL IASYLNVVQE SGFDDGYIKE IERAVLLKTL DCYWRDHLVN MNKLSSAVNV 1001: RSFAHRNPLE EYKIDGCRFF ISMLSATRRL TVESILQYWS SPMESQELFI S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)