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AT1G21640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD kinase 2
Curator
Summary (TAIR10)
Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.
Computational
Description (TAIR10)
NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2); Has 8697 Blast hits to 8591 proteins in 2758 species: Archae - 277; Bacteria - 5531; Metazoa - 247; Fungi - 416; Plants - 137; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1835-MONOMERBRENDA:2.7.1.23EC:2.7.1.23eggNOG:COG0061eggNOG:KOG2178EMBL:AC007727EMBL:AF337912
EMBL:AY099794EMBL:CP002684EnsemblPlants:AT1G21640EnsemblPlants:AT1G21640.1entrez:838766ExpressionAtlas:Q9C5W3Gene3D:2.60.200.30
Gene3D:3.40.50.10330Gene3D:3.90.190.10GeneID:838766Genevisible:Q9C5W3GO:GO:0003951GO:GO:0005524GO:GO:0006741
GO:GO:0009507GO:GO:0019674gramene_pathway:2.7.1.23gramene_pathway:PWY-5083HAMAP:MF_00361hmmpanther:PTHR20275hmmpanther:PTHR20275:SF6
HOGENOM:HOG000029602InParanoid:Q9C5W3InterPro:IPR002504InterPro:IPR016064InterPro:IPR017437InterPro:IPR017438InterPro:IPR029021
KEGG:00760+2.7.1.23PANTHER:PTHR20275PaxDb:Q9C5W3Pfam:PF01513Pfam:Q9C5W3PhylomeDB:Q9C5W3PIR:D86349
PRIDE:Q9C5W3PRO:PR:Q9C5W3ProteinModelPortal:Q9C5W3Proteomes:UP000006548RefSeq:NP_564145.1SMR:Q9C5W3STRING:3702.AT1G21640.2
SUPFAM:SSF111331SUPFAM:SSF52799TAIR:AT1G21640tair10-symbols:ATNADK2tair10-symbols:NADK2UniGene:At.28688UniGene:At.47967
UniProt:Q9C5W3
Coordinates (TAIR10) chr1:+:7588726..7592669
Molecular Weight (calculated) 109194.00 Da
IEP (calculated) 7.60
GRAVY (calculated) -0.35
Length 985 amino acids
Sequence (TAIR10)
(BLAST)
001: MFLCFCPCHV PIMSRLSPAT GISSRLRFSI GLSSDGRLIP FGFRFRRNDV PFKRRLRFVI RAQLSEAFSP DLGLDSQAVK SRDTSNLPWI GPVPGDIAEV
101: EAYCRIFRSA ERLHGALMET LCNPVTGECR VPYDFSPEEK PLLEDKIVSV LGCILSLLNK GRKEILSGRS SSMNSFNLDD VGVAEESLPP LAVFRGEMKR
201: CCESLHIALE NYLTPDDERS GIVWRKLQKL KNVCYDAGFP RSDNYPCQTL FANWDPIYSS NTKEDIDSYE SEIAFWRGGQ VTQEGLKWLI ENGFKTIVDL
301: RAEIVKDTFY QTALDDAISL GKITVVQIPI DVRMAPKAEQ VELFASIVSD SSKRPIYVHS KEGVWRTSAM VSRWKQYMTR PITKEIPVSE ESKRREVSET
401: KLGSNAVVSG KGVPDEQTDK VSEINEVDSR SASSQSKESG RFEGDTSASE FNMVSDPLKS QVPPGNIFSR KEMSKFLKSK SIAPAGYLTN PSKILGTVPT
501: PQFSYTGVTN GNQIVDKDSI RRLAETGNSN GTLLPTSSQS LDFGNGKFSN GNVHASDNTN KSISDNRGNG FSAAPIAVPP SDNLSRAVGS HSVRESQTQR
601: NNSGSSSDSS DDEAGAIEGN MCASATGVVR VQSRKKAEMF LVRTDGVSCT REKVTESSLA FTHPSTQQQM LLWKTTPKTV LLLKKLGQEL MEEAKEAASF
701: LYHQENMNVL VEPEVHDVFA RIPGFGFVQT FYIQDTSDLH ERVDFVACLG GDGVILHASN LFKGAVPPVV SFNLGSLGFL TSHPFEDFRQ DLKRVIHGNN
801: TLDGVYITLR MRLRCEIYRK GKAMPGKVFD VLNEIVVDRG SNPYLSKIEC YEHDRLITKV QGDGVIVATP TGSTAYSTAA GGSMVHPNVP CMLFTPICPH
901: SLSFRPVILP DSAKLELKIP DDARSNAWVS FDGKRRQQLS RGDSVRIYMS QHPLPTVNKS DQTGDWFRSL IRCLNWNERL DQKAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)