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AT1G21500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2EUeggNOG:ENOG410ZFG5EMBL:AC015447EMBL:AF370466
EMBL:AY081692EMBL:AY084224EMBL:CP002684EnsemblPlants:AT1G21500
EnsemblPlants:AT1G21500.1entrez:838749GeneID:838749GO:GO:0009534
Gramene:AT1G21500.1hmmpanther:PTHR37182HOGENOM:HOG000006262KEGG:ath:AT1G21500
ncoils:CoilOMA:AVPPINRPhylomeDB:Q9LPK9PIR:H86347
Proteomes:UP000006548RefSeq:NP_564142.1STRING:3702.AT1G21500.1TAIR:AT1G21500
UniGene:At.21705UniProt:Q9LPK9
Coordinates (TAIR10) chr1:-:7530047..7530954
Molecular Weight (calculated) 13259.30 Da
IEP (calculated) 11.40
GRAVY (calculated) -0.33
Length 126 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAHSLVPLS PAAHAARLSS PSPRSLPQAP PVVLAVPPIN RRTILVGLGG ALWSWNALAA KEEAMAAARR PPPPPPKEKK DPTVTGVQAK VLASKKRKEE
101: MKASIAKLRE KGKPVVEAKP SSSSSE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)