AT1G21090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cupredoxin superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cupredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972); Has 232 Blast hits to 228 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 9; Plants - 195; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:7384854..7386199 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26222.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.58 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.12 | ||||||||||||||||||||||||||||
| Length | 242 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCSQKHLTS MLFFYFFCFL SLFSRPSLSA TFLVDGVSVW KSPTVHTGDS VIFRHKYGYD LYIFRNKDAF NVCNFTQATL LTKPNSTSFT WYPSRTGSYY 101: FSFTNNTSLP KTCQLNQKLT VQVILAAASP PSQPPATAPV PVSEGGVISS PSSYPWPLGP REGSAFSPGP SPSEITSVTV PGKDGVPFIN SNPAVPLPTG 201: DVDSTSINPL PTSTNSAHQV MMMTLTVKLG LCCVAMFLFL VL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)