AT1G20830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : multiple chloroplast division site 1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020). | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MULTIPLE CHLOROPLAST DIVISION SITE 1 (MCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:7242933..7244736 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39418.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.34 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.62 | ||||||||||||||||||||||||||||||||
| Length | 349 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASIDSLQFH SLCNLQSSIG RAKLQNPSSL VIFRRRPVNL NWVQFETKGS FVCKAIGDSS TPDEDIQNTQ SDDNVVVVTA TTQSDIPHDS EYSISRFRSM 101: VTTLPPVVFL MKKCSVNSIW IGVCITATVL VAAIRAYVVR KSRDNQRAGS VADLVRRGQL RSGDRRGISK SLNYEDPFNN PFVKLDKGSS TVEMCGKVYR 201: LAPVTLTEKE QTIHQKRRSR AYQWKRPTIF LKEGDSIPPD VDPDTVRWIP ANHPFATTVS DIDQDLAQNN VYQKQGVPFR IRAEHEAMQK KLEALQNEEK 301: LNNLSIDSQN ARDFQRPYKF SAKLEGENIQ KNSQENHTGN SSSEETHKS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)