AT1G20560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : acyl activating enzyme 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 77741 Blast hits to 70781 proteins in 3571 species: Archae - 1189; Bacteria - 50806; Metazoa - 3349; Fungi - 3424; Plants - 2387; Viruses - 1; Other Eukaryotes - 16585 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:7119927..7121730 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61076.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.91 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 556 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKMEGTIKSP ANYVPLTPIS FLDRSAVVYA DRVSIVYGSV KYTWRQTRDR CVRIASALSQ LGISTGDVVS VLAPNVPAMV ELHFGVPMAG ALLCTLNIRH 101: DSSLVAVLLR HSGTKVIFAD HQFLQIAEGA CEILSNKGDK VPILVLIPEP LTQSVSRKKR SEEMMEYEDV VAMGKSDFEV IRPTDECDAI SVNYTSGTTS 201: SPKGVVYSHR GAYLNSLAAV LLNEMHSSPT YLWTNPMFHC NGWCLLWGVT AIGGTNICLR NVTAKAIFDN ISQHKVTHMG GAPTILNMII NAPESEQKPL 301: PGKVSFITGA APPPAHVIFK MEELGFSMFH SYGLTETYGP GTICTWKPEW DSLPREEQAK MKARQGVNHL GLEEIQVKDP VTMRTLPADG VTMGEVVFRG 401: NTVMNGYLKN PEATKEAFKG GWFWSGDLGV KHPDGYIELK DRSKDIIISG GENISSIEVE STLFTHPCVL EAAVVARPDE YWGETACAFV KLKDGSKASA 501: EELISYCRDR LPHYMAPRSI VFEDLPKTST GKVQKFVLRT KAKALVSLSK KGRSKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)