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AT1G20160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:16356755 (2006): extracellular region
  • PMID:15694452 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Subtilisin-like serine endopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 8668 Blast hits to 7419 proteins in 1217 species: Archae - 260; Bacteria - 4948; Metazoa - 184; Fungi - 671; Plants - 1928; Viruses - 0; Other Eukaryotes - 677 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G20160-MONOMERBioCyc:ARA:GQT-1482-MONOMEREC:3.4.14.10eggNOG:COG1404eggNOG:ENOG410IFX8EMBL:AC022472EMBL:AK228874
EMBL:AY087872EMBL:CP002684EnsemblPlants:AT1G20160EnsemblPlants:AT1G20160.1EnsemblPlants:AT1G20160.2entrez:838606ExpressionAtlas:Q9LNU1
Gene3D:3.30.70.80Gene3D:3.40.50.200GeneID:838606Genevisible:Q9LNU1GO:GO:0004252GO:GO:0005618GO:GO:0006508
GO:GO:0008236GO:GO:0010037GO:GO:0048046GO:GO:2000038GO:GO:2000122hmmpanther:PTHR10795hmmpanther:PTHR10795:SF328
HOGENOM:HOG000238262InParanoid:Q9LNU1InterPro:IPR000209InterPro:IPR010259InterPro:IPR015500InterPro:IPR022398InterPro:IPR023828
iPTMnet:Q9LNU1KEGG:ath:AT1G20160MEROPS:S08.A22ncoils:CoilOMA:VAKGIMVPANTHER:PTHR10795PaxDb:Q9LNU1
Pfam:PF00082Pfam:PF02225Pfam:PF05922Pfam:Q9LNU1PhylomeDB:Q9LNU1PIR:D86335PRIDE:Q9LNU1
PRINTS:PR00723PRO:PR:Q9LNU1PROSITE:PS00137PROSITE:PS00138ProteinModelPortal:Q9LNU1Proteomes:UP000006548RefSeq:NP_001031070.1
RefSeq:NP_564107.1scanprosite:PS00137scanprosite:PS00138SMR:Q9LNU1STRING:3702.AT1G20160.1SUPFAM:SSF52743TAIR:AT1G20160
tair10-symbols:ATSBT5.2UniGene:At.24841UniProt:Q9LNU1
Coordinates (TAIR10) chr1:-:6990852..6993854
Molecular Weight (calculated) 81484.40 Da
IEP (calculated) 5.82
GRAVY (calculated) -0.16
Length 769 amino acids
Sequence (TAIR10)
(BLAST)
001: MKGITFFTPF LSFLYLLCIL FMTETEAGSR NGDGVYIVYM GSASSAANAN RAQILINTMF KRRANDLLHT YKHGFSGFAA RLTAEEAKVI AKKPGVVSVF
101: PDPHFQLHTT HSWDFLKYQT SVKVDSGPPS SASDGSYDSI VGILDTGIWP ESESFNDKDM GPIPSRWKGT CMEAKDFKSS NCNRKIIGAR YYKNPDDDSE
201: YYTTRDVIGH GSHVSSTIAG SAVENASYYG VASGTAKGGS QNARIAMYKV CNPGGCTGSS ILAAFDDAIA DGVDVLSLSL GAPAYARIDL NTDPIAIGAF
301: HAVEQGILVI CSAGNDGPDG GTVTNTAPWI MTVAANTIDR DFESDVVLGG NKVIKGEGIH FSNVSKSPVY PLIHGKSAKS ADASEGSARA CDSDSLDQEK
401: VKGKIVLCEN VGGSYYASSA RDEVKSKGGT GCVFVDDRTR AVASAYGSFP TTVIDSKEAA EIFSYLNSTK DPVATILPTA TVEKFTPAPA VAYFSSRGPS
501: SLTRSILKPD ITAPGVSILA AWTGNDSSIS LEGKPASQYN VISGTSMAAP HVSAVASLIK SQHPTWGPSA IRSAIMTTAT QTNNDKGLIT TETGATATPY
601: DSGAGELSST ASMQPGLVYE TTETDYLNFL CYYGYNVTTI KAMSKAFPEN FTCPADSNLD LISTINYPSI GISGFKGNGS KTVTRTVTNV GEDGEAVYTV
701: SVETPPGFNI QVTPEKLQFT KDGEKLTYQV IVSATASLKQ DVFGALTWSN AKYKVRSPIV ISSESSRTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)