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AT1G19640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : jasmonic acid carboxyl methyltransferase
Curator
Summary (TAIR10)
Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.
Computational
Description (TAIR10)
jasmonic acid carboxyl methyltransferase (JMT); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 890 Blast hits to 871 proteins in 121 species: Archae - 0; Bacteria - 61; Metazoa - 9; Fungi - 5; Plants - 740; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G19640-MONOMERBRENDA:2.1.1.141EC:2.1.1.141eggNOG:ENOG410IHQR
eggNOG:ENOG410YFI3EMBL:AC024609EMBL:AK228480EMBL:AY008434
EMBL:AY008435EMBL:CP002684EnsemblPlants:AT1G19640EnsemblPlants:AT1G19640.1
entrez:838551Gene3D:3.40.50.150GeneID:838551Genevisible:Q9AR07
GO:GO:0005634GO:GO:0005737GO:GO:0009611GO:GO:0009694
GO:GO:0030795GO:GO:0031408Gramene:AT1G19640.1hmmpanther:PTHR31009
hmmpanther:PTHR31009:SF5HOGENOM:HOG000238197InParanoid:Q9AR07InterPro:IPR005299
InterPro:IPR029063KEGG:ath:AT1G19640KO:K08241OMA:YAKNSTA
PaxDb:Q9AR07Pfam:PF03492Pfam:Q9AR07PIR:B86329
PRIDE:Q9AR07PRO:PR:Q9AR07ProteinModelPortal:Q9AR07Proteomes:UP000006548
RefSeq:NP_173394.1SMR:Q9AR07STRING:3702.AT1G19640.1SUPFAM:SSF53335
TAIR:AT1G19640tair10-symbols:JMTUniGene:At.19036UniPathway:UPA00382
UniProt:Q9AR07
Coordinates (TAIR10) chr1:-:6789166..6791708
Molecular Weight (calculated) 43445.70 Da
IEP (calculated) 4.93
GRAVY (calculated) -0.24
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)