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AT1G19570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.505
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22215637 (2012): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19329564 (2009): peroxisome
  • PMID:17644812 (2007): plasma membrane
  • PMID:16207701 (2006): plastid
  • PMID:12954611 (2003): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : dehydroascorbate reductase
Curator
Summary (TAIR10)
Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Computational
Description (TAIR10)
dehydroascorbate reductase (DHAR1); FUNCTIONS IN: copper ion binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 5234 Blast hits to 5161 proteins in 1116 species: Archae - 0; Bacteria - 2090; Metazoa - 1076; Fungi - 186; Plants - 896; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G19570-MONOMERBioCyc:ARA:GQT-400-MONOMERBioGrid:23783EC:2.5.1.18
eggNOG:ENOG410INGWeggNOG:ENOG411205EEMBL:AC024609EMBL:AC025808
EMBL:AK117865EMBL:AY039590EMBL:AY052211EMBL:AY055790
EMBL:AY085426EMBL:CP002684EnsemblPlants:AT1G19570EnsemblPlants:AT1G19570.1
entrez:838544Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:838544
Genevisible:Q9FWR4GO:GO:0004364GO:GO:0005244GO:GO:0005507
GO:GO:0005739GO:GO:0005773GO:GO:0005777GO:GO:0005829
GO:GO:0005886GO:GO:0006952GO:GO:0009507GO:GO:0009570
GO:GO:0009610GO:GO:0009753GO:GO:0010043GO:GO:0010193
GO:GO:0010731GO:GO:0043903GO:GO:0045174GO:GO:0048046
GO:GO:0098869gramene_pathway:1.8.5.1gramene_pathway:PWY-2261hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF171HOGENOM:HOG000272670IntAct:Q9FWR4InterPro:IPR004045
InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT1G19570OMA:GFSIPEA
PaxDb:Q9FWR4Pfam:PF13410Pfam:PF13417Pfam:Q9FWR4
Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9FWR4PIR:D86328
PRIDE:Q9FWR4PRO:PR:Q9FWR4PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:Q9FWR4Proteomes:UP000006548RefSeq:NP_001077564.1RefSeq:NP_173387.1
SABIO-RK:Q9FWR4SMR:Q9FWR4STRING:3702.AT1G19570.1SUPFAM:SSF47616
SUPFAM:SSF52833TAIR:AT1G19570tair10-symbols:ATDHAR1tair10-symbols:DHAR1
tair10-symbols:DHAR5TCDB:1.A.12.2.1UniGene:At.24135UniGene:At.46960
UniProt:Q9FWR4
Coordinates (TAIR10) chr1:-:6773462..6774413
Molecular Weight (calculated) 23642.20 Da
IEP (calculated) 5.79
GRAVY (calculated) -0.17
Length 213 amino acids
Sequence (TAIR10)
(BLAST)
001: MALEICVKAA VGAPDHLGDC PFSQRALLTL EEKSLTYKIH LINLSDKPQW FLDISPQGKV PVLKIDDKWV TDSDVIVGIL EEKYPDPPLK TPAEFASVGS
101: NIFGTFGTFL KSKDSNDGSE HALLVELEAL ENHLKSHDGP FIAGERVSAV DLSLAPKLYH LQVALGHFKS WSVPESFPHV HNYMKTLFSL DSFEKTKTEE
201: KYVISGWAPK VNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)