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AT1G19340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Methyltransferase MT-A70 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink).
Protein Annotations
DNASU:838516EC:2.1.1.-eggNOG:ENOG410Y4SIeggNOG:KOG2356EMBL:AC025808EMBL:AK117739EMBL:AY084952
EMBL:CP002684EnsemblPlants:AT1G19340EnsemblPlants:AT1G19340.1entrez:838516GeneID:838516Genevisible:Q8LFA9GO:GO:0003676
GO:GO:0006139GO:GO:0008168Gramene:AT1G19340.1hmmpanther:PTHR12829HOGENOM:HOG000029811InParanoid:Q8LFA9InterPro:IPR002052
InterPro:IPR007757InterPro:IPR029063KEGG:ath:AT1G19340OMA:PWENASAPaxDb:Q8LFA9Pfam:PF05063Pfam:Q8LFA9
Pfscan:PS51143PRIDE:Q8LFA9PRO:PR:Q8LFA9PROSITE:PS00092PROSITE:PS51143Proteomes:UP000006548RefSeq:NP_564080.1
scanprosite:PS00092STRING:3702.AT1G19340.1SUPFAM:SSF53335TAIR:AT1G19340UniGene:At.41753UniProt:Q8LFA9
Coordinates (TAIR10) chr1:+:6684798..6686798
Molecular Weight (calculated) 47895.70 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.48
Length 414 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKTDKLAQF LDSGIYESDE FNWFFLDTVR ITNRSYTRFK VSPSAYYSRF FNSKQLNQHS SESNPKKRKR KQKNSSFHLP SVGEQASNLR HQEARLFLSK
101: AHESFLKEIE LLSLTKGLSD DNDDDDSSLL NKCCDDEVSF IELGGVWQAP FYEITLSFNL HCDNEGESCN EQRVFQVFNN LVVNEIGEEV EAEFSNRRYI
201: MPRNSCFYMS DLHHIRNLVP AKSEEGYNLI VIDPPWENAS AHQKSKYPTL PNQYFLSLPI KQLAHAEGAL VALWVTNREK LLSFVEKELF PAWGIKYVAT
301: MYWLKVKPDG TLICDLDLVH HKPYEYLLLG YHFTELAGSE KRSDFKLLDK NQIIMSIPGD FSRKPPIGDI LLKHTPGSQP ARCLELFARE MAAGWTSWGN
401: EPLHFQDSRY FLKV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)