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AT1G19020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1236eggNOG:KOG1361EMBL:AK175217EMBL:AK175525EMBL:AK176068EMBL:AK176907EMBL:AY065455
EMBL:AY087047EMBL:AY117287EMBL:CP002684EnsemblPlants:AT1G19020EnsemblPlants:AT1G19020.1entrez:838483GeneID:838483
GO:GO:0006979Gramene:AT1G19020.1hmmpanther:PTHR33386hmmpanther:PTHR33386:SF4KEGG:ath:AT1G19020OMA:MNGASWAPhylomeDB:Q8VYY6
Proteomes:UP000006548RefSeq:NP_564069.1STRING:3702.AT1G19020.1TAIR:AT1G19020UniGene:At.28474UniProt:Q8VYY6
Coordinates (TAIR10) chr1:+:6568142..6568402
Molecular Weight (calculated) 9155.68 Da
IEP (calculated) 10.90
GRAVY (calculated) -0.95
Length 86 amino acids
Sequence (TAIR10)
(BLAST)
1: MNGTSWADQW DNSGDSAKGG RIGSGAVVRS SGSGATSNTT KYKEKMGQGL DKTKAVASSG FKKLKTGSAI GFRWVKDKYH KTTHKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)