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AT1G18890.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcium-dependent protein kinase 1
Curator
Summary (TAIR10)
encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.
Computational
Description (TAIR10)
calcium-dependent protein kinase 1 (CDPK1); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 125370 Blast hits to 119826 proteins in 3847 species: Archae - 176; Bacteria - 14154; Metazoa - 46310; Fungi - 16874; Plants - 24900; Viruses - 438; Other Eukaryotes - 22518 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G18890-MONOMERBioGrid:23709EC:2.7.11.1eggNOG:ENOG410XRMJeggNOG:KOG0032EMBL:AC011809EMBL:AC068602
EMBL:AK227602EMBL:BT004566EMBL:CP002684EMBL:D21805EnsemblPlants:AT1G18890EnsemblPlants:AT1G18890.1entrez:838470
Gene3D:1.10.238.10GeneID:838470Genevisible:Q9M9V8GO:GO:0004672GO:GO:0004674GO:GO:0004683GO:GO:0005509
GO:GO:0005516GO:GO:0005524GO:GO:0005737GO:GO:0005886GO:GO:0009738GO:GO:0009931GO:GO:0018105
GO:GO:0035556GO:GO:0046777Gramene:AT1G18890.1hmmpanther:PTHR24349hmmpanther:PTHR24349:SF167HOGENOM:HOG000233030InParanoid:Q9M9V8
IntAct:Q9M9V8InterPro:IPR000719InterPro:IPR002048InterPro:IPR008271InterPro:IPR011009InterPro:IPR011992InterPro:IPR017441
InterPro:IPR018247iPTMnet:Q9M9V8KEGG:ath:AT1G18890KO:K13412OMA:MMCHSNGPaxDb:Q9M9V8Pfam:PF00069
Pfam:PF13499Pfam:Q9M9V8Pfscan:PS50011Pfscan:PS50222PhylomeDB:Q9M9V8PIR:H86322PIR:S46283
PRIDE:Q9M9V8PRO:PR:Q9M9V8PROSITE:PS00018PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50222
ProteinModelPortal:Q9M9V8Proteomes:UP000006548RefSeq:NP_564066.2scanprosite:PS00018scanprosite:PS00107scanprosite:PS00108SMART:SM00054
SMART:SM00220SMR:Q9M9V8STRING:3702.AT1G18890.1SUPFAM:SSF47473SUPFAM:SSF56112TAIR:AT1G18890tair10-symbols:ATCDPK1
tair10-symbols:AtCPK10tair10-symbols:CDPK1tair10-symbols:CPK10UniGene:At.267UniGene:At.75252UniProt:Q9M9V8
Coordinates (TAIR10) chr1:-:6523468..6525736
Molecular Weight (calculated) 61463.20 Da
IEP (calculated) 6.60
GRAVY (calculated) -0.34
Length 545 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)