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AT1G18670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
Computational
Description (TAIR10)
IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G74330.2); Has 121773 Blast hits to 120368 proteins in 4310 species: Archae - 86; Bacteria - 13259; Metazoa - 45481; Fungi - 12893; Plants - 29647; Viruses - 443; Other Eukaryotes - 19964 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XPIReggNOG:KOG0600EMBL:CP002684EnsemblPlants:AT1G18670
EnsemblPlants:AT1G18670.1entrez:838448GeneID:838448GO:GO:0004672
GO:GO:0005524GO:GO:0005886Gramene:AT1G18670.1hmmpanther:PTHR24056
hmmpanther:PTHR24056:SF228InParanoid:F4ICB6InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441iPTMnet:F4ICB6KEGG:ath:AT1G18670
OMA:MHIARANPaxDb:F4ICB6Pfam:PF00069Pfscan:PS50011
PRIDE:F4ICB6PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:F4ICB6Proteomes:UP000006548Reactome:R-ATH-112382Reactome:R-ATH-674695
RefSeq:NP_173302.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:F4ICB6STRING:3702.AT1G18670.1SUPFAM:SSF56112TAIR:AT1G18670
tair10-symbols:IBS1UniGene:At.51667UniProt:F4ICB6
Coordinates (TAIR10) chr1:-:6427242..6430696
Molecular Weight (calculated) 79539.30 Da
IEP (calculated) 9.11
GRAVY (calculated) -0.64
Length 709 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)