AT1G18480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6361639..6362814 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43284.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.45 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 391 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSRENPSGI CKSIPKLISS FVDTFVDYSV SGIFLPQDPS SQNEILQTRF EKPERLVAIG DLHGDLEKSR EAFKIAGLID SSDRWTGGST MVVQVGDVLD 101: RGGEELKILY FLEKLKREAE RAGGKILTMN GNHEIMNIEG DFRYVTKKGL EEFQIWADWY CLGNKMKTLC SGLDKPKDPY EGIPMSFPRM RADCFEGIRA 201: RIAALRPDGP IAKRFLTKNQ TVAVVGDSVF VHGGLLAEHI EYGLERINEE VRGWINGFKG GRYAPAYCRG GNSVVWLRKF SEEMAHKCDC AALEHALSTI 301: PGVKRMIMGH TIQDAGINGV CNDKAIRIDV GMSKGCADGL PEVLEIRRDS GVRIVTSNPL YKENLYSHVA PDSKTGLGLL VPVPKQVEVK A |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)