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AT1G18480.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.648
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink).
Protein Annotations
EC:3.1.-.-eggNOG:COG0639eggNOG:KOG0374EMBL:AC013354EMBL:AF428293EMBL:AY084413EMBL:BT000488
EMBL:CP002684EnsemblPlants:AT1G18480EnsemblPlants:AT1G18480.1entrez:838428Gene3D:3.60.21.10GeneID:838428Genevisible:Q944L7
GO:GO:0004721GO:GO:0005829GO:GO:0046872Gramene:AT1G18480.1hmmpanther:PTHR11668hmmpanther:PTHR11668:SF267HOGENOM:HOG000243414
InterPro:IPR004843InterPro:IPR029052iPTMnet:Q944L7KEGG:ath:AT1G18480OMA:PSCRDLPPaxDb:Q944L7Pfam:PF00149
Pfam:Q944L7PhylomeDB:Q944L7PIR:E86318PRIDE:Q944L7PRO:PR:Q944L7ProteinModelPortal:Q944L7Proteomes:UP000006548
RefSeq:NP_564053.1SMR:Q944L7STRING:3702.AT1G18480.1SUPFAM:SSF56300SwissPalm:Q944L7TAIR:AT1G18480UniGene:At.26261
UniProt:Q944L7
Coordinates (TAIR10) chr1:+:6361639..6362814
Molecular Weight (calculated) 43284.30 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.26
Length 391 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSRENPSGI CKSIPKLISS FVDTFVDYSV SGIFLPQDPS SQNEILQTRF EKPERLVAIG DLHGDLEKSR EAFKIAGLID SSDRWTGGST MVVQVGDVLD
101: RGGEELKILY FLEKLKREAE RAGGKILTMN GNHEIMNIEG DFRYVTKKGL EEFQIWADWY CLGNKMKTLC SGLDKPKDPY EGIPMSFPRM RADCFEGIRA
201: RIAALRPDGP IAKRFLTKNQ TVAVVGDSVF VHGGLLAEHI EYGLERINEE VRGWINGFKG GRYAPAYCRG GNSVVWLRKF SEEMAHKCDC AALEHALSTI
301: PGVKRMIMGH TIQDAGINGV CNDKAIRIDV GMSKGCADGL PEVLEIRRDS GVRIVTSNPL YKENLYSHVA PDSKTGLGLL VPVPKQVEVK A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)