AT1G18460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73920.1); Has 1698 Blast hits to 1679 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 1170; Fungi - 262; Plants - 165; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6352682..6355971 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79433.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.46 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||
| Length | 701 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQRIVDNALA ITKESVKTLT YESLNNIARC INGFSALLLT LLPGKSNVLE GLHGWELRPT LRGPRLPRWM HNGVSSFNHF IHELSVDSDT SSLDYSSGDD 101: DSDGMSTPPS PLSQSSLRSW ASLPANYESH WTDWITFIVW WALLPARILL WVPLYLLRLL ARRNSRMQPL SPGRYQHSSR PCFSKAISGK EHDVPNRTTD 201: KRRGVIEDLQ LGIEIFIETI FDFFHKAAHL LLSPSETFGI VLSWFSSSSH SSKGNYGDVS DDEIIQTAIL GDNDSSLTER RTTTSLYNTD TRTCQDVITE 301: LGYPYEAIRV VTSDGYGLLL ERIPRRDARK AVYLQHGVMD SSMGWVSNGV VGSPAFAAYD QGYDVFLGNF RGLVSRDHVK KNISSKDFWR YSINEHATED 401: IPAMIEKIHE IKTSELKLYQ PTMEEVVNED QPYKLCVVSH SLGGAAVLMY VITRKIEEKP HRLSRLILLS PAGFHYDSNM CFTLMEYTFL FLGPVLSRIV 501: PAFYIPTKFF RMLLNKLARD FHNYPAVGGL VQTLMSYVVG GDSSNWVGVM GLPHYNMNDM PGISFRVAQH LAQIKHSGKF KMFDYGSSSA NMDVYGSPEP 601: LDLGEFYGLI DVPVDLVAGK KDKVIRPSMV RKHYRVMRDS GVDVSYNEFE YAHLDFTFSH REELLAYVMS RLLLVEPTQT QTVHKKGMKL KKKMETGKPH 701: L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)