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AT1G18390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 21064 Blast hits to 20752 proteins in 1151 species: Archae - 24; Bacteria - 3918; Metazoa - 5271; Fungi - 1719; Plants - 7999; Viruses - 19; Other Eukaryotes - 2114 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G18390-MONOMERBioCyc:ARA:GQT-773-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC013354EMBL:AY090931
EMBL:AY800585EMBL:AY924673EMBL:CP002684EnsemblPlants:AT1G18390EnsemblPlants:AT1G18390.1EnsemblPlants:AT1G18390.2entrez:838420
ExpressionAtlas:P0C5E2Gene3D:2.60.120.200GeneID:838420Genevisible:P0C5E2GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0016021GO:GO:0030247GO:GO:0042631GO:GO:0048573GO:GO:0071215Gramene:AT1G18390.2hmmpanther:PTHR27005
hmmpanther:PTHR27005:SF31HOGENOM:HOG000116550InParanoid:P0C5E2InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR025287InterPro:IPR032872KEGG:ath:AT1G18390ncoils:CoilOMA:LEEREMH
PaxDb:P0C5E2Pfam:PF07714Pfam:PF13947Pfam:PF14380Pfam:Q5BQ05Pfscan:PS50011PIR:A86318
PRIDE:P0C5E2PRO:PR:P0C5E2PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:P0C5E2Proteomes:UP000006548
RefSeq:NP_001154349.1RefSeq:NP_173275.4scanprosite:PS00107scanprosite:PS00108SMART:SM00220STRING:3702.AT1G18390.2SUPFAM:SSF56112
TAIR:AT1G18390TMHMM:TMhelixUniGene:At.51663UniGene:At.68629UniProt:Q5BQ05
Coordinates (TAIR10) chr1:+:6325876..6329935
Molecular Weight (calculated) 72359.60 Da
IEP (calculated) 6.10
GRAVY (calculated) -0.26
Length 648 amino acids
Sequence (TAIR10)
(BLAST)
001: MSIFFFFISF VVFSVADLPS CFSADQQYEE CRSRNLTCGS GHRVFESTTY PFWGGFNKPK FCGHSSFKLS CEGDQNLTLA IGNITLRVVS ANLEDHKISV
101: ADDSLLDGGC LNIWNFNGKN QFTLDSNTET IDVFVNCSGV APLQISCEES YEDPVTYHVL RSSDSDEGCM KYAEIPMLRS AKDELQRSEL TFVEALRKGF
201: DLRYIMEDKA CRRCIDSGGI CGSALDSESF RCLCADRPHN SSCDDNTNQG KNDKRRRVIV KVLIGASAAV VGLIAASIFW YVYHRRKTKS YRNSSALLPR
301: NISSDPSAKS FDIEKAEELL VGVHIFSYEE LEEATNNFDP SKELGDGGFG TVYYGKLKDG RSVAVKRLYD NNFKRAEQFR NEVEILTGLR HPNLVALFGC
401: SSKQSRDLLL VYEYVANGTL ADHLHGPQAN PSSLPWSIRL KIAVETASAL KYLHASKIIH RDVKSNNILL DQNFNVKVAD FGLSRLFPMD KTHVSTAPQG
501: TPGYVDPDYH LCYQLSNKSD VYSFAVVLME LISSLPAVDI TRPRQEINLS NMAVVKIQNH ELRDMVDPSL GFDTDTRVRQ TVIAVAELAF QCLQSDKDLR
601: PCMSHVQDTL TRIQNNGFGS EMDVVDVNKS GPLVAQSPDS VIVKWDSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)