AT1G17540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.925 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G72760.1); Has 111948 Blast hits to 110754 proteins in 4644 species: Archae - 110; Bacteria - 12962; Metazoa - 41520; Fungi - 9180; Plants - 32064; Viruses - 278; Other Eukaryotes - 15834 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:6029551..6032641 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 80579.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 728 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAARRLKGKD SKAVTAIAID KDKNSQHALK WAVENIIIDS PNCILLHVQT KLRFGAGENT EAPHDNQEEA HQFFLPFRGF CARKGIIATE VLLHDIDISS 101: AIVDYITNNS ISNIVIGASA RNSFLKKFKS VDVPTTLLKT TPDTCAVFIV SKGKLLTSRS ASRPQTPQGP HTPQGPQTPQ APQHPPHPSK HPSMMSDPGP 201: TSSTSSESGR SSPALNGELS PPTPHYKPSL YRSSMSELSN EFPSDHSAES NASFYSILGR STYGGSSHSS MSEITDGEES LSGGNITEHQ NQNLEAEVRR 301: LRFELQQFNA SMSRESAPHL LGPRATAETE RLEEAKAARE MLRALSEMDK QKTQTAIQAT EVAQRLAEIE TQKRRLVEMQ ARFKEQNMAD SISYRRYSIR 401: DVEGATDGFS DALKIGEGGY GPVYKAVLEN TSVAIKLLKS DVSQGLKQFN QEIEVLSCMR HPNMVILLGA CPEYGCLVYE YMENGTLEDR LFCKDNTPPL 501: SWRARFRIAA EIATGLLFLH QAKPEPLVHR DLKPANILID RHFTSKISDV GLARLVPAAV ADSFSNYHMT AAAGTFCYID PEYQQTGMLG VKSDLYSFGV 601: VLLQIITAMP AMGLSHRVEK AIEKKKLREV LDPKISDWPE EETMVLAQLA LQCCELRKKD RPDLASVLLP ALSKLREFAT EDHEVHNSDR TFHVSRAHNL 701: VPLSPISSCQ TEDDAWENPI DRKIGTST |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)