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AT1G17530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : translocase of inner mitochondrial membrane 23
Curator
Summary (TAIR10)
Encodes a translocase of inner mitochondrial membrane.
Computational
Description (TAIR10)
translocase of inner mitochondrial membrane 23 (TIM23-1); CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim23 (InterPro:IPR005681), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 23-2 (TAIR:AT1G72750.1); Has 791 Blast hits to 791 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 393; Fungi - 198; Plants - 139; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5596eggNOG:KOG3324EMBL:AC022492EMBL:AY029217EMBL:AY045586EMBL:AY093787EMBL:AY463972
EMBL:CP002684EnsemblPlants:AT1G17530EnsemblPlants:AT1G17530.1entrez:838327GeneID:838327Genevisible:Q9LNQ1GO:GO:0005743
GO:GO:0005744GO:GO:0006626GO:GO:0015266GO:GO:0015450GO:GO:0030150GO:GO:0031305Gramene:AT1G17530.1
hmmpanther:PTHR15371hmmpanther:PTHR15371:SF7HOGENOM:HOG000166435InParanoid:Q9LNQ1InterPro:IPR003397iPTMnet:Q9LNQ1KEGG:ath:AT1G17530
KO:K17794OMA:AGRTWGNPaxDb:Q9LNQ1Pfam:PF02466Pfam:Q9LNQ1PhylomeDB:Q9LNQ1PRIDE:Q9LNQ1
PRO:PR:Q9LNQ1Proteomes:UP000006548RefSeq:NP_564028.1STRING:3702.AT1G17530.1TAIR:AT1G17530tair10-symbols:ATTIM23-1tair10-symbols:TIM23-1
TMHMM:TMhelixUniGene:At.22998UniProt:Q9LNQ1
Coordinates (TAIR10) chr1:+:6027723..6028286
Molecular Weight (calculated) 19975.60 Da
IEP (calculated) 9.97
GRAVY (calculated) -0.12
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MAINRSSDHE SDENTRLYHP YQNYQVPIKS QYLYKLPTSP EFLFTEESLK QRRSWGENLT FYTGTGYLAG SVAGASAGIF SGIKSFENGD TTKLKINRIL
101: NSSGQAGRTW GNRVGIVGLI YAGIESGVVA VTDKDDVWTS VVAGLGTGAV FRAARGVRSA AVAGAFGGIA AGAVVAGKQV FKRYAHI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)