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AT1G17230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.976
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G17230-MONOMEREC:2.7.11.1eggNOG:COG4886eggNOG:ENOG410IINBEMBL:AC007651EMBL:AK118516EMBL:CP002684
EnsemblPlants:AT1G17230EnsemblPlants:AT1G17230.1entrez:838294Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:838294Genevisible:Q9SHI2
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT1G17230.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF68
HOGENOM:HOG000116551InParanoid:Q9SHI2InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013210InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT1G17230OMA:ENYFVGQPaxDb:Q9SHI2Pfam:PF00069
Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfam:Q9SHI2Pfscan:PS50011PhylomeDB:Q9SHI2PIR:E86308
PRIDE:Q9SHI2PRO:PR:Q9SHI2PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9SHI2Proteomes:UP000006548RefSeq:NP_173166.2
scanprosite:PS00108SMART:SM00220SMART:SM00369SMR:Q9SHI2STRING:3702.AT1G17230.1SUPFAM:SSF52047SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT1G17230TMHMM:TMhelixUniGene:At.41848UniGene:At.69435UniGene:At.75601UniProt:Q9SHI2
Coordinates (TAIR10) chr1:+:5891375..5894855
Molecular Weight (calculated) 122107.00 Da
IEP (calculated) 7.24
GRAVY (calculated) -0.02
Length 1101 amino acids
Sequence (TAIR10)
(BLAST)
0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)