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AT1G17180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase TAU 25
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G17180-MONOMERBioGrid:23529EC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC007651EMBL:AK118907
EMBL:BT005643EMBL:CP002684EnsemblPlants:AT1G17180EnsemblPlants:AT1G17180.1entrez:838289Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:838289Genevisible:Q9SHH7GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749GO:GO:0009407
GO:GO:0009636GO:GO:0046256Gramene:AT1G17180.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF204HOGENOM:HOG000125749InParanoid:Q9SHH7
IntAct:Q9SHH7InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT1G17180KO:K00799OMA:LNIENEC
PaxDb:Q9SHH7Pfam:PF02798Pfam:PF13410Pfam:PF13417Pfam:Q9SHH7Pfscan:PS50404Pfscan:PS50405
PhylomeDB:Q9SHH7PIR:H86307PRIDE:Q9SHH7PRO:PR:Q9SHH7PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9SHH7
Proteomes:UP000006548RefSeq:NP_173161.1SMR:Q9SHH7STRING:3702.AT1G17180.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G17180
tair10-symbols:ATGSTU25tair10-symbols:GSTU25UniGene:At.41849UniProt:Q9SHH7
Coordinates (TAIR10) chr1:+:5872208..5872958
Molecular Weight (calculated) 25591.80 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.29
Length 221 amino acids
Sequence (TAIR10)
(BLAST)
001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)