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AT1G17170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.948
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase TAU 24
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 24 (GSTU24); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to cyclopentenone, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6259 Blast hits to 6243 proteins in 1151 species: Archae - 0; Bacteria - 2699; Metazoa - 624; Fungi - 140; Plants - 2013; Viruses - 0; Other Eukaryotes - 783 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G17170-MONOMERBioCyc:MetaCyc:AT1G17170-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC007651EMBL:BT012184
EMBL:CP002684EnsemblPlants:AT1G17170EnsemblPlants:AT1G17170.1entrez:838288Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:838288
Genevisible:Q9SHH6GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749GO:GO:0009407GO:GO:0009636
GO:GO:0043295GO:GO:0046256Gramene:AT1G17170.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF204HOGENOM:HOG000125749InParanoid:Q9SHH6
InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT1G17170KO:K00799ncoils:CoilOMA:CSKLIAW
PaxDb:Q9SHH6Pfam:PF02798Pfam:PF13410Pfam:PF13417Pfam:Q9SHH6Pfscan:PS50404Pfscan:PS50405
PhylomeDB:Q9SHH6PIR:G86307PRIDE:Q9SHH6PRO:PR:Q9SHH6PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9SHH6
Proteomes:UP000006548RefSeq:NP_173160.1SMR:Q9SHH6STRING:3702.AT1G17170.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G17170
tair10-symbols:ATGSTU24tair10-symbols:GSTtair10-symbols:GSTU24UniGene:At.41850UniProt:Q9SHH6
Coordinates (TAIR10) chr1:+:5869895..5870691
Molecular Weight (calculated) 25307.50 Da
IEP (calculated) 6.06
GRAVY (calculated) -0.34
Length 218 amino acids
Sequence (TAIR10)
(BLAST)
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)