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AT1G17010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.363
peroxisome 0.268
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8317 Blast hits to 8272 proteins in 989 species: Archae - 0; Bacteria - 1073; Metazoa - 106; Fungi - 910; Plants - 4938; Viruses - 0; Other Eukaryotes - 1290 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3491eggNOG:KOG0143EMBL:CP002684EnsemblPlants:AT1G17010
EnsemblPlants:AT1G17010.1entrez:838271Gene3D:2.60.120.330GeneID:838271
GO:GO:0005506GO:GO:0016491Gramene:AT1G17010.1gramene_pathway:1.14.11.9
gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYNhmmpanther:PTHR10209
hmmpanther:PTHR10209:SF168InParanoid:F4I629InterPro:IPR002283InterPro:IPR005123
InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT1G17010OMA:CSSELAK
PaxDb:F4I629Pfam:PF03171Pfam:PF14226Pfscan:PS51471
PRIDE:F4I629PRINTS:PR00682PROSITE:PS51471ProteinModelPortal:F4I629
Proteomes:UP000006548RefSeq:NP_173144.1SMR:F4I629SUPFAM:SSF51197
TAIR:AT1G17010UniGene:At.41857UniProt:F4I629
Coordinates (TAIR10) chr1:+:5817667..5819183
Molecular Weight (calculated) 41402.50 Da
IEP (calculated) 6.53
GRAVY (calculated) -0.26
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)