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AT1G16950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVUXeggNOG:ENOG41105JEEMBL:AC051629EMBL:BT010799
EMBL:BT011278EMBL:CP002684EnsemblPlants:AT1G16950EnsemblPlants:AT1G16950.1
entrez:838266GeneID:838266Gramene:AT1G16950.1hmmpanther:PTHR37180
hmmpanther:PTHR37180:SF1HOGENOM:HOG000090571IntAct:Q9FZ54KEGG:ath:AT1G16950
OMA:RMVPENSPhylomeDB:Q9FZ54PIR:B86305Proteomes:UP000006548
RefSeq:NP_173139.1TAIR:AT1G16950TMHMM:TMhelixUniGene:At.16046
UniProt:Q9FZ54
Coordinates (TAIR10) chr1:+:5796083..5796364
Molecular Weight (calculated) 9994.21 Da
IEP (calculated) 9.83
GRAVY (calculated) -0.15
Length 93 amino acids
Sequence (TAIR10)
(BLAST)
1: MARPRISISM ICLLILIVGF VLQSSQARKV LVPYGTSKGL FLSALPKGNV PPSGPSDKGH TSPPDDTDQR MVPENSPEIY RRLESVPSPG VGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)