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AT1G16900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Alg9-like mannosyltransferase family
Curator
Summary (TAIR10)
curculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein
Computational
Description (TAIR10)
Alg9-like mannosyltransferase family; FUNCTIONS IN: sugar binding, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT5G14850.2); Has 817 Blast hits to 803 proteins in 193 species: Archae - 0; Bacteria - 22; Metazoa - 302; Fungi - 301; Plants - 91; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G16900-MONOMERBioGrid:23501BRENDA:2.4.1.259BRENDA:2.4.1.261
CAZy:GT22EC:2.4.1.259EC:2.4.1.261eggNOG:ENOG410XP6D
eggNOG:KOG2515EMBL:AC051629EMBL:AY140061EMBL:BT010395
EMBL:CP002684EnsemblPlants:AT1G16900EnsemblPlants:AT1G16900.1entrez:838261
ExpressionAtlas:Q9FZ49GeneID:838261Genevisible:Q9FZ49GO:GO:0000026
GO:GO:0004377GO:GO:0005783GO:GO:0005789GO:GO:0006486
GO:GO:0006490GO:GO:0016021GO:GO:0016301GO:GO:0030433
GO:GO:0052918GO:GO:0052926GO:GO:0097502Gramene:AT1G16900.1
hmmpanther:PTHR22760hmmpanther:PTHR22760:SF2HOGENOM:HOG000205434InParanoid:Q9FZ49
IntAct:Q9FZ49InterPro:IPR005599KEGG:ath:AT1G16900KO:K03846
OMA:APLNIVWPANTHER:PTHR22760PaxDb:Q9FZ49Pfam:PF03901
Pfam:Q9FZ49PhylomeDB:Q9FZ49PIR:D86304PRIDE:Q9FZ49
PRO:PR:Q9FZ49ProteinModelPortal:Q9FZ49Proteomes:UP000006548Reactome:R-ATH-446193
RefSeq:NP_173134.2STRING:3702.AT1G16900.1TAIR:AT1G16900TMHMM:TMhelix
UniGene:At.41864UniPathway:UPA00378UniProt:Q9FZ49UniProt:W8QPA0
Coordinates (TAIR10) chr1:-:5779262..5782303
Molecular Weight (calculated) 65086.80 Da
IEP (calculated) 8.95
GRAVY (calculated) 0.18
Length 570 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLTTTRQRR PLISDSSSSS STKSYSKTDK PGRSNGGDAE DGGLRWFLPF IALCYLRYMS ATSNIIHDCD EVFNYWEPLH YILYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)