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AT1G16810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1754, eukaryotic (InterPro:IPR013865); Has 395 Blast hits to 394 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 91; Plants - 65; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41126B2eggNOG:KOG3410EMBL:AC051629EMBL:AY049240
EMBL:AY088262EMBL:AY142059EMBL:CP002684EnsemblPlants:AT1G16810
EnsemblPlants:AT1G16810.1EnsemblPlants:AT1G16810.2entrez:838252GeneID:838252
Gramene:AT1G16810.1Gramene:AT1G16810.2hmmpanther:PTHR13282hmmpanther:PTHR13282:SF6
HOGENOM:HOG000205758InterPro:IPR013865KEGG:ath:AT1G16810KO:K13120
OMA:THKRRVEPANTHER:PTHR13282Pfam:PF08555PhylomeDB:Q9FZ43
PIR:E86303Proteomes:UP000006548RefSeq:NP_001031060.1RefSeq:NP_564006.1
STRING:3702.AT1G16810.1TAIR:AT1G16810UniGene:At.16055UniGene:At.72370
UniProt:Q9FZ43
Coordinates (TAIR10) chr1:+:5756150..5756694
Molecular Weight (calculated) 16383.30 Da
IEP (calculated) 6.37
GRAVY (calculated) -1.21
Length 144 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAYDNVIGG KLKLKGKALD VKAGGVKKKK KHKRQEEQAL KITDHELIEG ESTEALGKLI EGEEGDEEMN RSEKASEDAK LQQQLDDDDH LTPAERRYIE
101: QKQRLDVQKL AKEANKSHRN RIEDFNQYLA NMSEHYDIPK VGPG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)