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AT1G16770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGD0eggNOG:ENOG4111WG3EMBL:AC026237EMBL:AY924672EMBL:CP002684EMBL:DQ132651EnsemblPlants:AT1G16770
EnsemblPlants:AT1G16770.1entrez:838248ExpressionAtlas:Q9FWR1GeneID:838248Gramene:AT1G16770.1hmmpanther:PTHR34776hmmpanther:PTHR34776:SF1
HOGENOM:HOG000006214OMA:AMNVEPEPhylomeDB:Q9FWR1Proteomes:UP000006548RefSeq:NP_173121.1TAIR:AT1G16770UniGene:At.51638
UniProt:Q9FWR1
Coordinates (TAIR10) chr1:+:5737900..5739110
Molecular Weight (calculated) 36218.40 Da
IEP (calculated) 5.34
GRAVY (calculated) -0.91
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MGQGKEVKTR PDPQVEIQER GEIFFFYRPK VNKEEAHSVD DVQRLYIVMR PESGENPTEE KQDPLSGKEG SDKDSGDGEA SGSSSGAKNQ GEGGHGVEKV
101: NIEKQLLLRF IVMGKKSLPD PSKKSQPFWG FVEMVTTNVE DVKNALKGEE YETKTRGHRH KPPARAVGEG IYRILRHKPN PTRKHHTHLV YKLEFPSVSQ
201: TREHEPQESL NIEPEGSFLI QIRNPEQGGG GRSGFGGLQR KRKAQFPVHI QAHLGHTRFG PADPPDFLNY EGCELLLISA SDDIEEELGM ELEPEGDGEE
301: STCDLLKTFG DDVEATPLLR GTWE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)