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AT1G16730.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : unknown protein 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein 6 (UP6); Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J7DHeggNOG:ENOG41114IMEMBL:AC026237EMBL:CP002684EnsemblPlants:AT1G16730EnsemblPlants:AT1G16730.1entrez:838244
GeneID:838244GO:GO:0005777Gramene:AT1G16730.1HOGENOM:HOG000152579KEGG:ath:AT1G16730OMA:YSPNHAIPhylomeDB:Q9FWQ7
PIR:G86302Proteomes:UP000006548RefSeq:NP_173117.1STRING:3702.AT1G16730.1TAIR:AT1G16730tair10-symbols:UP6UniGene:At.27283
UniGene:At.49888UniProt:Q9FWQ7
Coordinates (TAIR10) chr1:-:5726617..5727312
Molecular Weight (calculated) 21687.20 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.56
Length 202 amino acids
Sequence (TAIR10)
(BLAST)
001: MENHHRISAT KYNGEAVSDD VGQGKLYSPN HAIKISPESD ENVGQGNLYS PDHAIKIATN PDSVDSSSEE EEGEKQRKTI MLGLKNLAAV KDKVLEKLSA
101: ASVPSESLEN AKQFLEGAIK DFAGAAQGMT KDALHRIKTQ LAVIVPSVSP AVTEKIVDDA EKEAIDGEEE DESKSKESSG KLPFVSPTSS FFSSLAKPFS
201: KL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)