AT1G16650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 486 Blast hits to 429 proteins in 154 species: Archae - 0; Bacteria - 55; Metazoa - 267; Fungi - 96; Plants - 28; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5687994..5691101 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57612.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.65 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||
| Length | 521 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSNKFSCKT RAETLEWITA IIDFLKPFSF LINAHVVNFF KDKQWEAVNE EWMSCLKDEK PENILLIPSG GVQDHWPASL KKFVHTLRSL SFPREQADLQ 101: AILADVDMVP LSTVLSQGMN LKKKHEVEVL SSVVSSVVKS VGAPTVVDVG AGQGYLAQVL SFQYKHSVVA IDSSSHHGKV TDARAARIKK HFAAQMRKSG 201: SGNKCPDVPM TITCRVLSTE MLKALTDVHL EKDETDSSGS ALNEEGQSRS QSSSDANRSC SLVLAGLHAC GDLSVTMLRT FMECEEVKAL VSIGCCYNLL 301: SEKSSEDSCS KCGYPMSAGL RSLGFSLGKN ARDLACQSAE RWSSLGEDAG LQNFELHSFR AAFQMVLSKH YPEVLATSPS IGRQGKAFRR QQQRKSLETP 401: AAVDTTRKDT VDKKPMRQTS LNSDMCSSFE KFCLSAFSRL NLEHPRDLDL NATWNEADAF TELIGPYWSI RAALGPVLET LILLDRLMFL QEQGDSIKVV 501: MLPIFDPTIS PRNVAIIARR L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)