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AT1G16650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.881
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 486 Blast hits to 429 proteins in 154 species: Archae - 0; Bacteria - 55; Metazoa - 267; Fungi - 96; Plants - 28; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2284-MONOMEReggNOG:ENOG410XPIUeggNOG:KOG2651EMBL:BT033025EMBL:CP002684EnsemblPlants:AT1G16650EnsemblPlants:AT1G16650.1
entrez:838234Gene3D:3.40.50.150GeneID:838234Gramene:AT1G16650.1hmmpanther:PTHR12496hmmpanther:PTHR12496:SF0HOGENOM:HOG000030566
InterPro:IPR025714InterPro:IPR029063KEGG:ath:AT1G16650OMA:ITTELNFPfam:PF13679PhylomeDB:B3DNN7Proteomes:UP000006548
RefSeq:NP_173110.2SMR:B3DNN7STRING:3702.AT1G16650.1SUPFAM:SSF53335TAIR:AT1G16650UniGene:At.49887UniProt:B3DNN7
Coordinates (TAIR10) chr1:+:5687994..5691101
Molecular Weight (calculated) 57612.10 Da
IEP (calculated) 7.65
GRAVY (calculated) -0.19
Length 521 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSNKFSCKT RAETLEWITA IIDFLKPFSF LINAHVVNFF KDKQWEAVNE EWMSCLKDEK PENILLIPSG GVQDHWPASL KKFVHTLRSL SFPREQADLQ
101: AILADVDMVP LSTVLSQGMN LKKKHEVEVL SSVVSSVVKS VGAPTVVDVG AGQGYLAQVL SFQYKHSVVA IDSSSHHGKV TDARAARIKK HFAAQMRKSG
201: SGNKCPDVPM TITCRVLSTE MLKALTDVHL EKDETDSSGS ALNEEGQSRS QSSSDANRSC SLVLAGLHAC GDLSVTMLRT FMECEEVKAL VSIGCCYNLL
301: SEKSSEDSCS KCGYPMSAGL RSLGFSLGKN ARDLACQSAE RWSSLGEDAG LQNFELHSFR AAFQMVLSKH YPEVLATSPS IGRQGKAFRR QQQRKSLETP
401: AAVDTTRKDT VDKKPMRQTS LNSDMCSSFE KFCLSAFSRL NLEHPRDLDL NATWNEADAF TELIGPYWSI RAALGPVLET LILLDRLMFL QEQGDSIKVV
501: MLPIFDPTIS PRNVAIIARR L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)