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AT1G16350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Aldolase-type TIM barrel family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79470.1); Has 13531 Blast hits to 12775 proteins in 2707 species: Archae - 178; Bacteria - 7353; Metazoa - 466; Fungi - 180; Plants - 86; Viruses - 2; Other Eukaryotes - 5266 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G16350-MONOMERBioGrid:23444EC:1.1.1.205eggNOG:COG0516eggNOG:KOG2550EMBL:AC006341EMBL:CP002684
EnsemblPlants:AT1G16350EnsemblPlants:AT1G16350.1entrez:838204Gene3D:3.20.20.70GeneID:838204Genevisible:Q9SA34GO:GO:0003938
GO:GO:0005829GO:GO:0006177GO:GO:0009735GO:GO:0046872Gramene:AT1G16350.1gramene_pathway:1.1.1.205gramene_pathway:DENOVOPURINE3-PWY
gramene_pathway:PWY-5695gramene_pathway:PWY-6596gramene_pathway:PWY-841HAMAP:MF_01964hmmpanther:PTHR11911hmmpanther:PTHR11911:SF6HOGENOM:HOG000165752
InterPro:IPR001093InterPro:IPR005990InterPro:IPR013785InterPro:IPR015875KEGG:00230+1.1.1.205KEGG:00983+1.1.1.205KEGG:ath:AT1G16350
KO:K00088OMA:KVKSTMCPANTHER:PTHR11911:SF6PaxDb:Q9SA34Pfam:PF00478Pfam:Q9SA34PhylomeDB:Q9SA34
PIR:F86298PIRSF:PIRSF000130PRIDE:Q9SA34PRO:PR:Q9SA34PROSITE:PS00487ProteinModelPortal:Q9SA34Proteomes:UP000006548
Reactome:R-ATH-73817RefSeq:NP_173085.1scanprosite:PS00487SMR:Q9SA34STRING:3702.AT1G16350.1SUPFAM:SSF51412SUPFAM:SSF54631
TAIR:AT1G16350TIGRfam:TIGR01302TIGRFAMs:TIGR01302UniGene:At.41887UniPathway:UPA00601UniProt:Q9SA34
Coordinates (TAIR10) chr1:+:5590951..5592872
Molecular Weight (calculated) 54054.50 Da
IEP (calculated) 6.44
GRAVY (calculated) -0.13
Length 502 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGFEDGFSA EKLFSQGYSY TYDDVIFLPH FIDFSTDAVS LSTRLSKRVP LSIPCVASPM DTVSESHMAA AMAALGGIGI VHYNCDIDTQ ASVIRHAKSL
101: QVPIASDAVF KCPEHQIGSV DDFGPSSFVF VSQTGTLTPK LLGYVSKSEW SSMKDDQKEV KIYDYMKSCE NKDYYVPWDI DLDKIEAVLE DKQKGFVVLE
201: KEGETVNVVT KDDVERVKGY PKLGSGTVGA DKKWMVGAAI GTRESDKERL EHLVKAGANV VVLDSSQGNS IYQLEMIKYV KNTYPELDVV GGNVVTMYQA
301: ENLIKAGVDG LRVGMGSGSI CTTQEVCAVG RGQATAVYKV STLAAQHGVP VIADGGISNS GHIVKALVLG ASTVMMGSFL AGSTEAPGAY EYRNGRRVKK
401: YRGMGSLEAM TKGSDQRYLG DTAKLKIAQG VVGAVADKGS VLKFIPYTMH AVKQGFQDLG ASSLQSAHEL LRDNTLRLEA RTGAAQIEGG IHGLVSYEKK
501: SF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)