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AT1G15840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.987
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 111484 Blast hits to 29940 proteins in 1985 species: Archae - 153; Bacteria - 40635; Metazoa - 31564; Fungi - 6444; Plants - 10232; Viruses - 1710; Other Eukaryotes - 20746 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G15840EnsemblPlants:AT1G15840.1entrez:838154GeneID:838154Gramene:AT1G15840.1KEGG:ath:AT1G15840
OMA:FESCAQWPaxDb:F4I179PRIDE:F4I179ProteinModelPortal:F4I179Proteomes:UP000006548RefSeq:NP_173036.1STRING:3702.AT1G15840.1
TAIR:AT1G15840UniGene:At.41913UniProt:F4I179
Coordinates (TAIR10) chr1:+:5451723..5452123
Molecular Weight (calculated) 10975.40 Da
IEP (calculated) 8.52
GRAVY (calculated) -0.74
Length 126 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAEVAITAE VVSGGGGDGT KGGGNTITGG GGEGKKKNGG GEGGGGEGTS GEGGGGGGDG TKGGGDGISG GGHGDGLGCS GGGGDGTKGG GRRGDGLGRG
101: LGRGGGRGGW NGRKGFSGEG VVGKGQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)