AT1G15830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.962 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 165982 Blast hits to 57214 proteins in 2459 species: Archae - 263; Bacteria - 44622; Metazoa - 55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other Eukaryotes - 34550 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5448726..5450177 | ||||||||||||||||||||
| Molecular Weight (calculated) | 43302.90 Da | ||||||||||||||||||||
| IEP (calculated) | 9.99 | ||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||
| Length | 483 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTGGVNVDWS IGGSMVTSGG GGCPMTISGG RLFTGGGDPV IITGGRLSTG AAGGVNVDRS KGGGRRKTGD GGGDPVVISG GENHASGGMG GTSATRGGGG 101: EPVIPGAPPP NRGGGETVIP GAPPPIRGGG GEPAIPGAPP PKRGGGGEPV IPGAPPPKRG GGGEPVIPGA PPPKRGGGGE PVIPGAPPPK RGGGGEPVIP 201: GAPPPKRGGG GEPVIPGAPP PKRGGGGEPV IPGAPLPKRG GGGESVVPGA PPPKRGGGVI VNGGCETVPP GRGGGGDKTN GRGGEGREED NGGGRGAEGG 301: GRGSTGEGVT DGGGRTGNKG GNGGSIKIGV GTNGITGGTG GGEAGAGMQV MQGWGGGGSG AATQVMQGCG GGDAGAITQV MQGWGGGGAG AVTQVMQGCG 401: GGGGGGDGGG GQGTGIGGGG GGEQGTGVGG GGDTCTQVTH GGGGAPLTMI GGGGGEQGVT GSDGGGGRGR GGGKVAGGGK KGF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)