AT1G15490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.537 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G80280.1); Has 5830 Blast hits to 5818 proteins in 1057 species: Archae - 56; Bacteria - 4179; Metazoa - 223; Fungi - 71; Plants - 420; Viruses - 1; Other Eukaryotes - 880 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5320859..5323422 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71286.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.60 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.14 | ||||||||||||||||||||||||||||||||||||
| Length | 648 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKSWFLVEK ARRCLRTVFF MVAMLASLLV SSLPLLVAIG DVLVPSFLLS SFTCVTCYGA KEHLRRYGFK RSLTDIPIVS VVRSFLVICI YLLSDVPALS 101: HGPYLGTVSL CSVVSVLLLS VKACLFTVNS QLNNEASFSP SRKRLHLKKS WGMPVLFLSS VVFALGHTVV AYRTSCRARR KILYHRVDPE AVLSCKSIFS 201: GHQKVPRSPT PVVGKASKFD GEARRKPLSH DEGELPVRLL ADVDSLFVTI RGLTVHYKLC SPGSPRQSIS SNVLEANSSY NTPEIMAGRS KFDRKVLSMV 301: TKSQHHHHHR SYNSLFNNSS LHDPLLDGSP TSPLLFKEIK EGTGLVDDMN VFNFGAEEQD LGESGQFGVV LVHGFGGGVF SWRHVMGSLA QQLGCVVTAF 401: DRPGWGLTAR PHKNDLEERQ LLNPYSLENQ VEMLIAFCYE MGFSSVVFVG HDDGGLLALK AAQRLMATND PIKVVVKGVV LLNTSLSREV VPAFARILLH 501: TSLGKKHLVR PLLRTEIAQV VNRRAWYDPA KMTTDVLRLY KAPLHVEGWD EALHEIGRLS SEMVLAPQNA ASLLKAVENL PVLVIAGAED ALVPLKSSQG 601: MASKLLNSRL VAISGCGHLP HEECPKALLA AMSPFITRLV IRPDLQSQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)