AT1G15410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : aspartate-glutamate racemase family | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
aspartate-glutamate racemase family; FUNCTIONS IN: racemase and epimerase activity, acting on amino acids and derivatives; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Asp/Glu/hydantoin racemase (InterPro:IPR015942), Aspartate racemase (InterPro:IPR004380), Asp/Glu racemase (InterPro:IPR001920); Has 2436 Blast hits to 2424 proteins in 674 species: Archae - 57; Bacteria - 1708; Metazoa - 0; Fungi - 2; Plants - 35; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5299577..5300681 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36707.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.16 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||
| Length | 330 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYLQIFNNPS HGLAHLCYSS RVSCRVRLSR VLAMPPSSVL LHMDESNDLP KPKKGFCLSE DSRNSLNSLP ADSLLRQANT VGIIGGVSTD STLKFVKKLV 101: DWSSNDGKSS LPFVLCSDPA LNKELLLYEE NSYPSLYHRE ESTPVDPKLI VENLRNKRRY LERCGAKLIL MPCHIAHIWY EEVCEGSLVP LLHMGECIAK 201: ELQEAKMKPL EAGNPLRVGV MATSATLSAG FYQEKLQSNG FEAVLPDKAT MEHTVIPSIE AMKRKDMEGA RNLLRIALQV LLVQAVNVVM LGSDEMRDLL 301: PGDDPLLKKC VDPMDALARS AIKWAENRCS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)