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AT1G15130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Endosomal targeting BRO1-like domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQX6eggNOG:KOG2220EMBL:CP002684EnsemblPlants:AT1G15130EnsemblPlants:AT1G15130.1entrez:838077Gene3D:1.25.40.280
GeneID:838077GO:GO:0005829GO:GO:0009506Gramene:AT1G15130.1gramene_plant_reactome:1119265gramene_plant_reactome:6875175hmmpanther:PTHR23030
hmmpanther:PTHR23030:SF13InParanoid:F4HXZ1InterPro:IPR004328InterPro:IPR025304KEGG:ath:AT1G15130KO:K12200ncoils:Coil
OMA:SEWIHHMPaxDb:F4HXZ1Pfam:PF03097Pfam:PF13949Pfscan:PS51180PRIDE:F4HXZ1PROSITE:PS51180
ProteinModelPortal:F4HXZ1Proteomes:UP000006548Reactome:R-ATH-5666185RefSeq:NP_172965.1SMART:SM01041SMR:F4HXZ1STRING:3702.AT1G15130.1
TAIR:AT1G15130UniGene:At.27732UniProt:F4HXZ1
Coordinates (TAIR10) chr1:-:5206217..5209848
Molecular Weight (calculated) 95214.00 Da
IEP (calculated) 6.41
GRAVY (calculated) -0.58
Length 846 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSLSNLM LAIHEKKTSS VDLYRPLRNY VTFTYSEREA QLIDDDLETL KQLRSDIERV SDPSPAARRD LLISYYKVLC LVETRFPISP DKDHVNAVSF
101: VWYDAFKQKH KATQQNIHLE KAAVLFNLGA SYSQIGLGHD RTTVDGRRQA SHAFMAAAGA FAHLRDNESI KATIGPSTTV DVSVECVGML ERLMVAQAQE
201: CVFENTIAKG STPGVSAKIA RQVGIFYEEA LSALIISPLK DHFDKGWISH VQLKAALFYG EACFRYGKEL HEKEEIAEEI ARLRSGASRL AEAKKSSRGA
301: PAQLIEAMNT LESSINGNLD RAVKENDRVY LMRVPSPSSL SPLPAFSMVK PMNMTDILDA SKEKMFSILV PDSSAKALSR YTEMVDDVIR TQAERLQQAS
401: ELTRVRLKEM DLPDSILAVD GNSALPVDLK EDVEAVQISG GPAGLEAELQ QLRDLKRVNQ ELLVHTEELL QKEATEDSQF RSQFGTRWTR PQSSTLTKNL
501: QDRLNRFAAN LKQAGESDVK IERSVRDNSA LMSILDRRPI ESAVPTLARP IMSLDATEDA IVGTLKQSLR QLENLGAQRA GLEDMLKEMK RKDDILPKLM
601: TITGSYEDMF RKEISKYDHI CEDISQNIEV QEQLLMQIQA QNEEFSTIFN LEDYKASKEK CYKQIQAAIM KYREIKENIN EGLKFYVTLQ DAITNVKQQC
701: SDFVMTRSIQ CRDMIEDVQR QMSGLSFQDH RSSGPYPSVH QPTASSPPPP PETQNPSHPH PHAPYYRPPE QMSRPGYSIP PYGPPPPYHT PHGQAPQPYP
801: PQAQQQPHPS WQQGSYYDPQ GQQPRPPYPG QSPYQPPHQG GGYYRQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)